Struct ArbitraryPotentialFreelyJointedChain

pub struct ArbitraryPotentialFreelyJointedChain<T>where
    T: Potential,{
    pub link_potential: T,
    pub number_of_links: u8,
    pub ensemble: Ensemble,
}

Expand description

The freely-jointed chain model with an arbitrary link potential.¹

M.R. Buche, M.N. Silberstein, and S.J. Grutzik, Physical Review E 106, 024502 (2022). ↩

Fields§

§link_potential: T

The link potential $u$.

§number_of_links: u8

The number of links $N_b$.

§ensemble: Ensemble

The thermodynamic ensemble.

Trait Implementations§

Returns a duplicate of the value. Read more

Performs copy-assignment from source. Read more

Formats the value using the given formatter. Read more

\varrho(\eta) = \ln\left[\frac{\eta}{\sinh(\eta)}\right] - \ln\left[1 + \frac{\eta}{c\kappa}\,\coth(\eta)\right] - \beta v(\eta)

\gamma(\eta) = \mathcal{L}(\eta) + \frac{\eta}{\kappa}\left[\frac{1 - \mathcal{L}(\eta)\coth(\eta)}{c + (\eta/\kappa)\coth(\eta)}\right] + \Delta\lambda(\eta)

\zeta(\eta) = \mathcal{L}(\eta) + \frac{\partial}{\partial\eta}\left\{\frac{\eta}{\kappa}\left[\frac{1 - \mathcal{L}(\eta)\coth(\eta)}{c + (\eta/\kappa)\coth(\eta)}\right]\right\} + \zeta(\eta)

Auto Trait Implementations§

Blanket Implementations§

Gets the TypeId of self. Read more

Immutably borrows from an owned value. Read more

Mutably borrows from an owned value. Read more

🔬This is a nightly-only experimental API. (clone_to_uninit)

Performs copy-assignment from self to dest. Read more

Returns the argument unchanged.

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

The resulting type after obtaining ownership.

Creates owned data from borrowed data, usually by cloning. Read more

Uses borrowed data to replace owned data, usually by cloning. Read more

The type returned in the event of a conversion error.

Performs the conversion.

The type returned in the event of a conversion error.

Performs the conversion.

ArbitraryPotentialFreelyJointedChain

Struct ArbitraryPotentialFreelyJointedChain Copy item path

Fields§

Trait Implementations§

impl<T> Clone for ArbitraryPotentialFreelyJointedChain<T>where T: Potential + Clone,

fn clone(&self) -> ArbitraryPotentialFreelyJointedChain<T>

fn clone_from(&mut self, source: &Self)

impl<T> Debug for ArbitraryPotentialFreelyJointedChain<T>where T: Potential + Debug,

fn fmt(&self, f: &mut Formatter<'_>) -> Result

impl<T> Isometric for ArbitraryPotentialFreelyJointedChain<T>where T: Potential,

fn nondimensional_helmholtz_free_energy( &self, _nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_force( &self, _nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_stiffness( &self, _nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_spherical_distribution( &self, _nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_helmholtz_free_energy_per_link( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_radial_distribution( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

impl<T> Isotensional for ArbitraryPotentialFreelyJointedChain<T>where T: Potential,

fn nondimensional_gibbs_free_energy_per_link( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_extension( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_compliance( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_gibbs_free_energy( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

impl<T> Legendre for ArbitraryPotentialFreelyJointedChain<T>where T: Potential,

fn nondimensional_spherical_distribution( &self, _nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_helmholtz_free_energy( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_helmholtz_free_energy_per_link( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_force( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_stiffness( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_radial_distribution( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_gibbs_free_energy( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_gibbs_free_energy_per_link( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_extension( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_compliance( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

impl<T> SingleChain for ArbitraryPotentialFreelyJointedChain<T>where T: Potential,

fn link_length(&self) -> Scalar

fn number_of_links(&self) -> u8

impl<T> Thermodynamics for ArbitraryPotentialFreelyJointedChain<T>where T: Potential,

fn ensemble(&self) -> Ensemble

fn temperature(&self) -> Scalar

fn nondimensional_helmholtz_free_energy( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_helmholtz_free_energy_per_link( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_force( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_stiffness( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_radial_distribution( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_spherical_distribution( &self, nondimensional_extension: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_gibbs_free_energy( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_gibbs_free_energy_per_link( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_extension( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

fn nondimensional_compliance( &self, nondimensional_force: Scalar, ) -> Result<Scalar, SingleChainError>

Auto Trait Implementations§

impl<T> Freeze for ArbitraryPotentialFreelyJointedChain<T>where T: Freeze,

impl<T> RefUnwindSafe for ArbitraryPotentialFreelyJointedChain<T>where T: RefUnwindSafe,

impl<T> Send for ArbitraryPotentialFreelyJointedChain<T>where T: Send,

impl<T> Sync for ArbitraryPotentialFreelyJointedChain<T>where T: Sync,

impl<T> Unpin for ArbitraryPotentialFreelyJointedChain<T>where T: Unpin,

impl<T> UnwindSafe for ArbitraryPotentialFreelyJointedChain<T>where T: UnwindSafe,

Blanket Implementations§

impl<T> Any for Twhere T: 'static + ?Sized,

fn type_id(&self) -> TypeId

impl<T> Borrow<T> for Twhere T: ?Sized,

fn borrow(&self) -> &T

impl<T> BorrowMut<T> for Twhere T: ?Sized,

fn borrow_mut(&mut self) -> &mut T

impl<T> CloneToUninit for Twhere T: Clone,

unsafe fn clone_to_uninit(&self, dest: *mut u8)

impl<T> From<T> for T

fn from(t: T) -> T

impl<T, U> Into<U> for Twhere U: From<T>,

fn into(self) -> U

impl<T> ToOwned for Twhere T: Clone,

type Owned = T

fn to_owned(&self) -> T

fn clone_into(&self, target: &mut T)

impl<T, U> TryFrom<U> for Twhere U: Into<T>,

type Error = Infallible

fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

impl<T, U> TryInto<U> for Twhere U: TryFrom<T>,

type Error = <U as TryFrom<T>>::Error

fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Struct ArbitraryPotentialFreelyJointedChain

impl<T> Clone for ArbitraryPotentialFreelyJointedChain<T>
where T: Potential + Clone,

impl<T> Debug for ArbitraryPotentialFreelyJointedChain<T>
where T: Potential + Debug,

impl<T> Isometric for ArbitraryPotentialFreelyJointedChain<T>
where T: Potential,

impl<T> Isotensional for ArbitraryPotentialFreelyJointedChain<T>
where T: Potential,

impl<T> Legendre for ArbitraryPotentialFreelyJointedChain<T>
where T: Potential,

impl<T> SingleChain for ArbitraryPotentialFreelyJointedChain<T>
where T: Potential,

impl<T> Thermodynamics for ArbitraryPotentialFreelyJointedChain<T>
where T: Potential,

impl<T> Freeze for ArbitraryPotentialFreelyJointedChain<T>
where T: Freeze,

impl<T> RefUnwindSafe for ArbitraryPotentialFreelyJointedChain<T>
where T: RefUnwindSafe,

impl<T> Send for ArbitraryPotentialFreelyJointedChain<T>
where T: Send,

impl<T> Sync for ArbitraryPotentialFreelyJointedChain<T>
where T: Sync,

impl<T> Unpin for ArbitraryPotentialFreelyJointedChain<T>
where T: Unpin,

impl<T> UnwindSafe for ArbitraryPotentialFreelyJointedChain<T>
where T: UnwindSafe,

impl<T> Any for T
where T: 'static + ?Sized,

impl<T> Borrow<T> for T
where T: ?Sized,

impl<T> BorrowMut<T> for T
where T: ?Sized,

impl<T> CloneToUninit for T
where T: Clone,

impl<T, U> Into<U> for T
where U: From<T>,

impl<T> ToOwned for T
where T: Clone,

impl<T, U> TryFrom<U> for T
where U: Into<T>,

impl<T, U> TryInto<U> for T
where U: TryFrom<T>,